Skill Market

healthcare eval harness

ヘルスケアAIモデル評価ハーネス、臨床メトリクス、およびレギュレーション遵守の検証。

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Skill Introduction

Overview
ヘルスケアAIモデル評価ハーネス、臨床メトリクス、およびレギュレーション遵守の検証。

Core value

Turns reusable Testing know-how into an installable skill, helping users complete github, community work faster.

Target users

  • Developers, testers, and maintainers who handle Testing tasks in Focus Code.
  • Teams that already trust workflows or content from affaan-m.
  • Users who want standardized prompts, steps, or conventions instead of repeating setup work.

Best practices

  • Read the skill content first to confirm required inputs, expected outputs, and dependencies.
  • Try it on a small task before relying on it for critical work.
  • Add project-specific constraints such as coding style, target platform, test expectations, and delivery format.
  • For external sources, verify the source link, version, and recent maintenance activity.

Best use cases

  • Tasks related to github, community that need a reusable execution flow.
  • Converting a community repo, team convention, or personal workflow into day-to-day assistance.
  • Starting from a proven skill instead of writing prompts or procedures from scratch.

Limits and boundaries

  • Results depend on the quality of the original skill content and may need human correction.
  • It does not replace code review, tests, security review, or professional judgment.
  • External tools, APIs, account permissions, and local dependencies still need separate setup.

Differentiation

  • Structured around Testing, making it easier to discover and reuse than loose prompt snippets.
  • Marked as GitHub, which helps users judge trust and maintenance expectations.
  • Keeps the original source link available for repository, documentation, or discussion follow-up.
  • Tagged with github, community, so it can be filtered by concrete task intent.

Install and use

Install
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focus install healthcare-eval-harness-8e6ed9
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name: healthcare-eval-harness description: ヘルスケアAIモデル評価ハーネス、臨床メトリクス、およびレギュレーション遵守の検証。 origin: Health1 Super Speciality Hospitals — contributed by Dr. Keyur Patel version: "1.0.0"

Healthcare Eval Harness — Patient Safety Verification

Automated verification system for healthcare application deployments. A single CRITICAL failure blocks deployment. Patient safety is non-negotiable.

Note: Examples use Jest as the reference test runner. Adapt commands for your framework (Vitest, pytest, PHPUnit, etc.) — the test categories and pass thresholds are framework-agnostic.

When to Use

  • Before any deployment of EMR/EHR applications
  • After modifying CDSS logic (drug interactions, dose validation, scoring)
  • After changing database schemas that touch patient data
  • After modifying authentication or access control
  • During CI/CD pipeline configuration for healthcare apps
  • After resolving merge conflicts in clinical modules

How It Works

The eval harness runs five test categories in order. The first three (CDSS Accuracy, PHI Exposure, Data Integrity) are CRITICAL gates requiring 100% pass rate — a single failure blocks deployment. The remaining two (Clinical Workflow, Integration) are HIGH gates requiring 95%+ pass rate.

Each category maps to a Jest test path pattern. The CI pipeline runs CRITICAL gates with --bail (stop on first failure) and enforces coverage thresholds with --coverage --coverageThreshold.

Eval Categories

1. CDSS Accuracy (CRITICAL — 100% required)

Tests all clinical decision support logic: drug interaction pairs (both directions), dose validation rules, clinical scoring vs published specs, no false negatives, no silent failures.

npx jest --testPathPattern='tests/cdss' --bail --ci --coverage

2. PHI Exposure (CRITICAL — 100% required)

Tests for protected health information leaks: API error responses, console output, URL parameters, browser storage, cross-facility isolation, unauthenticated access, service role key absence.

npx jest --testPathPattern='tests/security/phi' --bail --ci

3. Data Integrity (CRITICAL — 100% required)

Tests clinical data safety: locked encounters, audit trail entries, cascade delete protection, concurrent edit handling, no orphaned records.

npx jest --testPathPattern='tests/data-integrity' --bail --ci

4. Clinical Workflow (HIGH — 95%+ required)

Tests end-to-end flows: encounter lifecycle, template rendering, medication sets, drug/diagnosis search, prescription PDF, red flag alerts.

tmp_json=$(mktemp)
npx jest --testPathPattern='tests/clinical' --ci --json --outputFile="$tmp_json" || true
total=$(jq '.numTotalTests // 0' "$tmp_json")
passed=$(jq '.numPassedTests // 0' "$tmp_json")
if [ "$total" -eq 0 ]; then
  echo "No clinical tests found" >&2
  exit 1
fi
rate=$(echo "scale=2; $passed * 100 / $total" | bc)
echo "Clinical pass rate: ${rate}% ($passed/$total)"

5. Integration Compliance (HIGH — 95%+ required)

Tests external systems: HL7 message parsing (v2.x), FHIR validation, lab result mapping, malformed message handling.

tmp_json=$(mktemp)
npx jest --testPathPattern='tests/integration' --ci --json --outputFile="$tmp_json" || true
total=$(jq '.numTotalTests // 0' "$tmp_json")
passed=$(jq '.numPassedTests // 0' "$tmp_json")
if [ "$total" -eq 0 ]; then
  echo "No integration tests found" >&2
  exit 1
fi
rate=$(echo "scale=2; $passed * 100 / $total" | bc)
echo "Integration pass rate: ${rate}% ($passed/$total)"

Pass/Fail Matrix

CategoryThresholdOn Failure
CDSS Accuracy100%BLOCK deployment
PHI Exposure100%BLOCK deployment
Data Integrity100%BLOCK deployment
Clinical Workflow95%+WARN, allow with review
Integration95%+WARN, allow with review

CI/CD Integration

name: Healthcare Safety Gate
on: [push, pull_request]

jobs:
  safety-gate:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-node@v4
        with:
          node-version: '20'
      - run: npm ci

      # CRITICAL gates — 100% required, bail on first failure
      - name: CDSS Accuracy
        run: npx jest --testPathPattern='tests/cdss' --bail --ci --coverage --coverageThreshold='{"global":{"branches":80,"functions":80,"lines":80}}'

      - name: PHI Exposure Check
        run: npx jest --testPathPattern='tests/security/phi' --bail --ci

      - name: Data Integrity
        run: npx jest --testPathPattern='tests/data-integrity' --bail --ci

      # HIGH gates — 95%+ required, custom threshold check
      # HIGH gates — 95%+ required
      - name: Clinical Workflows
        run: |
          TMP_JSON=$(mktemp)
          npx jest --testPathPattern='tests/clinical' --ci --json --outputFile="$TMP_JSON" || true
          TOTAL=$(jq '.numTotalTests // 0' "$TMP_JSON")
          PASSED=$(jq '.numPassedTests // 0' "$TMP_JSON")
          if [ "$TOTAL" -eq 0 ]; then
            echo "::error::No clinical tests found"; exit 1
          fi
          RATE=$(echo "scale=2; $PASSED * 100 / $TOTAL" | bc)
          echo "Pass rate: ${RATE}% ($PASSED/$TOTAL)"
          if (( $(echo "$RATE < 95" | bc -l) )); then
            echo "::warning::Clinical pass rate ${RATE}% below 95%"
          fi

      - name: Integration Compliance
        run: |
          TMP_JSON=$(mktemp)
          npx jest --testPathPattern='tests/integration' --ci --json --outputFile="$TMP_JSON" || true
          TOTAL=$(jq '.numTotalTests // 0' "$TMP_JSON")
          PASSED=$(jq '.numPassedTests // 0' "$TMP_JSON")
          if [ "$TOTAL" -eq 0 ]; then
            echo "::error::No integration tests found"; exit 1
          fi
          RATE=$(echo "scale=2; $PASSED * 100 / $TOTAL" | bc)
          echo "Pass rate: ${RATE}% ($PASSED/$TOTAL)"
          if (( $(echo "$RATE < 95" | bc -l) )); then
            echo "::warning::Integration pass rate ${RATE}% below 95%"
          fi

Anti-Patterns

  • Skipping CDSS tests "because they passed last time"
  • Setting CRITICAL thresholds below 100%
  • Using --no-bail on CRITICAL test suites
  • Mocking the CDSS engine in integration tests (must test real logic)
  • Allowing deployments when safety gate is red
  • Running tests without --coverage on CDSS suites

Examples

Example 1: Run All Critical Gates Locally

npx jest --testPathPattern='tests/cdss' --bail --ci --coverage && \
npx jest --testPathPattern='tests/security/phi' --bail --ci && \
npx jest --testPathPattern='tests/data-integrity' --bail --ci

Example 2: Check HIGH Gate Pass Rate

tmp_json=$(mktemp)
npx jest --testPathPattern='tests/clinical' --ci --json --outputFile="$tmp_json" || true
jq '{
  passed: (.numPassedTests // 0),
  total: (.numTotalTests // 0),
  rate: (if (.numTotalTests // 0) == 0 then 0 else ((.numPassedTests // 0) / (.numTotalTests // 1) * 100) end)
}' "$tmp_json"
# Expected: { "passed": 21, "total": 22, "rate": 95.45 }

Example 3: Eval Report

## Healthcare Eval: 2026-03-27 [commit abc1234]

### Patient Safety: PASS

| Category | Tests | Pass | Fail | Status |
|----------|-------|------|------|--------|
| CDSS Accuracy | 39 | 39 | 0 | PASS |
| PHI Exposure | 8 | 8 | 0 | PASS |
| Data Integrity | 12 | 12 | 0 | PASS |
| Clinical Workflow | 22 | 21 | 1 | 95.5% PASS |
| Integration | 6 | 6 | 0 | PASS |

### Coverage: 84% (target: 80%+)
### Verdict: SAFE TO DEPLOY

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